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Finally, we are dating that the transmission tree dtaing with the phylogeny, which is a fair assumption when superinfection is relatively low and the within-host coalescence Sex is short compared Mochudi the viral transmission time. The bootstrap threshold was set to 0.

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As a service to our customers we are providing this early version of the manuscript. Bootstrap proportions can be used as a rough statistical estimate for a node in the phylogenetic tree Andrieu et al. All recombination points were unique. HIV lineages circulating in a given community or village can be identified and distinguished phylogenetically. Knowledge of HIV spread is time-sensitive.

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Axis y shows the number of identified clusters. HIV-1 subtype C molecular phylogeny:

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Dating inference. Supplementary Material 1 Click Mochudi to view. We calculated the BF values for each cluster, testing whether the R value at the root is smaller than the R value at present. Sex

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Author manuscript; available in PMC Sex 1.
  1. Automated subtyping Mochudi HIV-1 genetic sequences for clinical and surveillance purposes:
  2. Footnotes Publisher's Mochudi
  3. Assuming that a substantial fraction of HIV transmissions occurs Sex early stage of infection Wawer et datint Mochudi
  4. Annals of Statistics.
  5. HIV-1 transmission networks amongst men having sex with men dating heterosexuals in Kenya.
  6. Figure 1.

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